Functional characterization of sugarcane mustang domesticated transposases and comparative diversity in sugarcane, rice, maize and sorghum
نویسندگان
چکیده
Transposable elements (TEs) account for a large portion of plant genomes, particularly in grasses, in which they correspond to 50%-80% of the genomic content. TEs have recently been shown to be a source of new genes and new regulatory networks. The most striking contribution of TEs is referred as "molecular domestication", by which the element coding sequence loses its movement capacity and acquires cellular function. Recently, domesticated transposases known as mustang and derived from the Mutator element have been described in sugarcane. In order to improve our understanding of the function of these proteins, we identified mustang genes from Sorghum bicolor and Zea mays and performed a phenetic analysis to assess the diversity and evolutionary history of this gene family. This analysis identified orthologous groups and showed that mustang genes are highly conserved in grass genomes. We also explored the transcriptional activity of sugarcane mustang genes in heterologous and homologous systems. These genes were found to be ubiquitously transcribed, with shoot apical meristem having the highest expression levels, and were downregulated by phytohormones. Together, these findings suggest the possible involvement of mustang proteins in the maintenance of hormonal homeostasis.
منابع مشابه
AFLP, pathogenicity and mating type analysis of Iranian Fusarium proliferatum isolates recovered from maize, rice, sugarcane and onion
Assessment of eighty Fusarium proliferatum isolates obtained from maize, rice, sugarcane and onion using AFLP molecular marker separated the isolates into four distinct clusters according to their host’s. Isolates recovered from rice clustered in a distinct group. Isolates from sugarcane grouped in two distinct groups and isolates recovered from maize and onion clustered in a unit group. As wel...
متن کاملDomestication to Crop Improvement: Genetic Resources for Sorghum and Saccharum (Andropogoneae)
BACKGROUND Both sorghum (Sorghum bicolor) and sugarcane (Saccharum officinarum) are members of the Andropogoneae tribe in the Poaceae and are each other's closest relatives amongst cultivated plants. Both are relatively recent domesticates and comparatively little of the genetic potential of these taxa and their wild relatives has been captured by breeding programmes to date. This review assess...
متن کاملMexican rice borer (Lepidoptera: Crambidae) injury to corn greater than to sorghum and sugarcane under field conditions.
The Mexican rice borer, Eoreuma loftini (Dyar) (Lepidoptera: Crambidae), is the key pest of sugarcane (Saccharum spp.) in Texas; it can attack several grassy crop and noncrop host plants and has spread into Louisiana. Through small-plot, commercial field, and pheromone trap experiments, this study demonstrates that the pest uses corn, Zea mays L., more than sugarcane and sorghum, Sorghum bicolo...
متن کاملComparative expression analysis of two sugarcane polyubiquitin promoters and flanking sequences in transgenic plants.
GUS (uidA) reporter gene expression for two sugarcane polyubiquitin promoters, ubi4 and ubi9, was compared to expression from the maize Ubi-1 promoter in stable transgenic rice (only ubi9) and sugarcane (ubi4 and ubi9). Ubi9 drove high-level GUS expression, comparable to the maize Ubi-1 promoter, in both callus and regenerated plants of rice transformed by Agrobacterium. This high level express...
متن کاملEvaluation of genes effect and combining ability in selected maize (Zea mays L.) lines
To evaluate radiation use efficiency and weed control, this experiment was conducted in two locations in Ahwaz, Iran, in a randomized complete block design with 14 treatments and four replications in 2016-2017. Treatments included: Sole sugarcane, Sole soybean, Sole cowpea, Sole soybean+rhizobium, Sole cowpea+rhizobium, Sole sugarcane+mycorrhizal, Intercropping sugarcane with cowpea, Intercropp...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
دوره 35 شماره
صفحات -
تاریخ انتشار 2012